Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKITVFGMGSFGTALANVLAENGHDVLMWGKNQDAVDELNTCHTNKKYLKYAKLDVNIIATSDMTKAIQFADIYLMALPTKAMREVATQINDKLTSKKTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKSVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCISTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE |
| 1Z82 Chain:A ((16-325)) | --RFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSP-YVEESKITVR--ATNDLEE-IKKEDILVIAIPVQYIREHLLRLPVKPS---MVLNLSKGIEIKTGKRVSEIVEEILGCPY----AVLSGPSHAEEVAKKLPTAVTLAGEN---SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARGFNPLKLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYEGKPPLQSMRDLMR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217181 for 2842 contacts (-76.4/contact) +
2D Compatibility (PS) -32325 + (NN) -4006 + (LL) 1528
1D Compatibility (HY) -25200 + (ID) 7050
Total energy: -284234.0 ( -100.01 by residue)
QMean score : 0.553
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