Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKNILKSGIALSELGLGCMSLGTDLKKAEQIIDCAVENGITYFDTADMYDKGINESVVGKALLKYQQRDDIFIGTKVGNRLTKDGSTTWDPSKSYIKEAVKGSLKRLGIDHIDLYQLHGGTIDDPLDETISAFDELKQEGIIRAYGISSIRPNVIDYYLKHSQIETIMSQFNLIDNRPESLLDAIHNNDVKVLARGPVSKGLLTSNSVNVLDNKFKDGIFDYSHDELGETIASIKEIESNLSALTFSYLTSHDVLGSIIVGASSVDQLKENIENYHTKVGLDQIKTARARVKDLEYTNHLV |
| 1YNP Chain:A ((23-288)) | -KRQLGTSDLHVSELGFGCMSLGTDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG--RRQDIILATKV--------------SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYSILDRRPEEWFPLIQEHGVSVVVRGPVARGLLSRRPL-----PEGEGYLNYRYDELKLLRESLP-TDRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQ---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162350 for 2063 contacts (-78.7/contact) +
2D Compatibility (PS) -26666 + (NN) -9750 + (LL) 2720
1D Compatibility (HY) -27200 + (ID) 6750
Total energy: -229996.0 ( -111.49 by residue)
QMean score : 0.668
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