Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MDMNFDLYMNGVVEQARNEIESAGYEQLTTAEDVDKVLKQ-DGTTLVMINSVCGCAGGIARPAASHALH-YDVLPDRLVTVFAGQDKEATQRAREYFEGYAPSSPSFALVKDGKITEMIERHQIEGHDVMNVINQLQTLFNKYCEER
3FHK Chain:A ((1-147))
SNAMSMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFMEKAEGTTLVVVNSVCGCAAGLARPAATQAVLQNDKTPDNTVTVFAGQDKEATAKMREYFTGAAPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMKNLTAAFDAHC---
General information:
TITO was launched using:
RESULT:
Template:
3FHK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77270 for 1132 contacts (-68.3/contact) +
2D Compatibility (PS) -15759 + (NN) -8785 + (LL) 308
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -117656.0 ( -103.94 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_3FHK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FHK-query.scw
PDB file :
Tito_Scwrl_3FHK.pdb
: