Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
5AJ3 Chain:U ((8-65))
IARTVMVQEGNVEGAYRTLNRILTMDGLIEDIKRRRYYEKPCRRRQRESYETCRRIYN
General information:
TITO was launched using:
RESULT:
Template:
5AJ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12711 for 249 contacts (51.0/contact) +
2D Compatibility (PS) -6469 + (NN) -3452 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -2410.0 ( -9.68 by residue)
QMean score : 0.681
(partial model without unconserved sides chains):
PDB file :
Tito_5AJ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AJ3-query.scw
PDB file :
Tito_Scwrl_5AJ3.pdb
: