Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITDRQLSILNAIVEDYVDFGQPVGSKTLIERHNLNVSPATIRNEMKQLEDLNYIEKTHSSSGRSPSQLGFRYYVNRLLEQTSHQKTNKLRRLNQLLVENQYDVSSALTYFADELSNISQYTTLVVHPNHKQDIINNVHLIRANPNLVIMVIVFSSGHVEHVHLASDIPFSNDKLNTISNFVTNKLTEFNQNLQDDIVSFVQSEQEEIFINKLINTMNNHISNQSNSIYMGGKVKLIDALNESNVSSIQPILQYIESNRIAELLQDISSPNINVKIGNEID-DSLSDISIVTSQYHFDETLKGQIAVIGPTAMHYQNVIQLLNRIW----------- |
| 1STZ Chain:A ((14-336)) | KLNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGRIPTDKGLRFYYEEMLKISKETSEAD-LAVETFKSMPLADPEKVLFLAGNLLARLTEGYVLIERPNTRDLKILRVMLIPVSEDYLIFSILTEFGVSKVTPIKTQERLNWEEIERQLNFLLRGRT---------VGEVLMGKIESLKGSGFLRLIESLIGETVERYLDAG----LENLLKDETLTLEDIRNLLEEVKDQKFLESLVGEGITVRIGREIGRKKLEKFAVFSGKYFKGESPIGSVYLFTSKVTKYDRNHRVFEYILNRLSEYFTSTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1STZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176885 for 2370 contacts (-74.6/contact) +
2D Compatibility (PS) -33625 + (NN) -11468 + (LL) 1012
1D Compatibility (HY) -20800 + (ID) 3450
Total energy: -245216.0 ( -103.47 by residue)
QMean score : 0.475
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