Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHNNFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYEH
2H29 Chain:A ((1-188))
MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYE-
General information:
TITO was launched using:
RESULT:
Template:
2H29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148399 for 1450 contacts (-102.3/contact) +
2D Compatibility (PS) -20132 + (NN) -7007 + (LL) 44
1D Compatibility (HY) -30000 + (ID) 9300
Total energy: -214794.0 ( -148.13 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_2H29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H29-query.scw
PDB file :
Tito_Scwrl_2H29.pdb
: