Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRNLKLKKESDFEFTKNHKRLLLGSVFLMATSAIGPAFLTQTAVFTSQFFASFAFAILLSIIIDIGAQINIWRILVVTGLRGQEISNKVVPGLGTVISILIA-FGGLAFNIGNIAGAGLGLNAIFGLDVKWGAAITAIFAI--LIFVSKSGQKIMDVVSMILGIVMILVVAYVMFVSNPPYGDAFVHTFAPEHPMKLVLPIITLVGGTVGGYITFAGAHRILDSGIKGKQYLPFVNQSAIAGI----LTTGIMRTLLFLAVLGVVVTGVTL---SSENPPASVFE--HAI----------GPIGKNIFGIVLFAAAMSSVIGSAYTSATFLKT-LHKSL-NERSNLIVIVFIVISTMIFLFIGKPIS-----LLIIAGAINGWILPITLGAILIASKKKSIVGDYKHPNWMFIFGIVAVLVTILTGIFSFKEVLQLF |
| 4WGV Chain:A ((21-396)) | -----------------------------------------------AQYGYTLLFVILISSLAAMLLQSMTVRLGIATGKDLAQMTRHFLSKPVAIIFWIIAELAIIATDIAEVIGSAIALDLIFGIPLIVGALIT-VFDVFLLLFIMRFGFRKIEAIVGTLIFTVLAIFVFEVFISSPQLTD-ILNGFVPHKEIVTNQGILYIALGIIGATIMPHNLY-LHSSIVQSRKYDRHDNEEKAQAIKYATIDSNLQLSIAFVVNCLLLTLGAALFFGTKTNDLGGFYDLYHALKTEPVLGATLGGVMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLSIPNWLRRLITRSLAVIPVIICLIIFKGNSEKIEQLLVFSQVFLSIALPFSLIPLQLATSNKKLMGPFINKTWVNI--ISWTLIVILSGL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286516 for 2670 contacts (-107.3/contact) +
2D Compatibility (PS) -35082 + (NN) -9993 + (LL) 5196
1D Compatibility (HY) -30400 + (ID) 4050
Total energy: -360845.0 ( -135.15 by residue)
QMean score : 0.278
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