Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIRLNYK
4PEO Chain:A ((1-106))
MITVDITVNDEGKVTDVIMDG-------------AGASAVLFGSVNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYN-NIRLNYK
General information:
TITO was launched using:
RESULT:
Template:
4PEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56883 for 637 contacts (-89.3/contact) +
2D Compatibility (PS) -10243 + (NN) -7042 + (LL) 532
1D Compatibility (HY) -13200 + (ID) 4600
Total energy: -91436.0 ( -143.54 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_4PEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PEO-query.scw
PDB file :
Tito_Scwrl_4PEO.pdb
: