Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHVGGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRIKPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPVLSILTSIGLDHTDILGGTYLDIARDKGAIIKPNVPVIYAVKNEDALKYVRERAIEQHAKPIELDREIVVV--SQ--N-DEFTYRYKDYELETIILSMLGEHQKQNAALAITALIELNEQGLIELD--FNKMIDGIE-SVRWTGRIEQVH-DKPLIILDGAHNSESIDALIDTIKQYHDKEKVDILFSAINGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIEND--EIQLVDDYVEFIKNYQGDTLVITGSLYFISEVKSKLDFEAL |
1O5Z Chain:A ((13-435)) | MAYLEVLRYLYHK----VKPGLERISMLLSKLGNPHLEYKTIHIGGTNGKGSVANMVSNILVSQGYRVGSYYSPHLSTFRERIRLNEEYISEEDVVKIYETMEPILNELDK-EEIFSPSFFEVVTAMAFLYFAEK-NVDIAVLEVGLGGRLDATNVVFPLCSTIVTVDR-------YTIEQIAWEKSGIIKERVPLVTGERKREALKVMEDVARKKSSRMYVIDKDFSVKVKSLKLHENRFDYCGE-NTFEDLVLTMNGPHQIENAGVALKTLEAT------GLPLSEKAIREGLKNAK-NLGRFEILEKNGKMYILDGAHNPHGAESLVRSLKLYFNGEPLSLVIGILDDKNREDILRKYTGIFERVIVTRVPSPRMKDMNSLVDMAKKFFKNVEVIEDPLEAIES-TERATVVTGSLFLVGYVREFLTTGK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271418 for 3601 contacts (-75.4/contact) +
2D Compatibility (PS) -43579 + (NN) -15114 + (LL) 1020
1D Compatibility (HY) -32800 + (ID) 6150
Total energy: -368041.0 ( -102.21 by residue)
QMean score : 0.554
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