Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYKNILLGVDTQLKNEKALKEVSKLAG-EGTVVTVLNAISEQDAQASIKAGVH---------LNKLTEERSKRLEKTRKALEDYGIDYDQIIVRGNAKEELLKHANSGKYEIVVLSNRKAEDKKKFVLGSVSHKVAKRATIPVLIVK
1MJH Chain:B ((4-158))
MYKKILYPTDFSETAEIALKHVKAFKTLKAEEVILLHVIDEREIK--------SVEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVK
General information:
TITO was launched using:
RESULT:
Template:
1MJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34385 for 994 contacts (-34.6/contact) +
2D Compatibility (PS) -14255 + (NN) -9472 + (LL) 592
1D Compatibility (HY) -12800 + (ID) 2400
Total energy: -72720.0 ( -73.16 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_1MJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MJH-query.scw
PDB file :
Tito_Scwrl_1MJH.pdb
: