Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MKKILFDVDGIFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG--------------------LKGKDAAGELEAHHADYVINHLGELRGVLDNL- |
1FEZ Chain:A ((1-256)) | KIEAVIFDWAGTTVDYGC-----------------------------------------FAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVF-----------------------------------------------RQLPTEADIQEMYEEFEEILFAILPRY-----------------------------ASPINAVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVT------------PDDVPAGRPYPWMCYKNAMELG-------------VYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115779 for 1963 contacts (-59.0/contact) +
2D Compatibility (PS) -24957 + (NN) -12441 + (LL) 10596
1D Compatibility (HY) -8400 + (ID) 1850
Total energy: -152831.0 ( -77.86 by residue)
QMean score : 0.479
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