Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWS---KQYNANERNQINLPTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKS--------TYWDKNKGDYS--NKLILFEKHFEPVPGIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAHK--NPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN |
| 4O98 Chain:A ((40-294)) | MALGDFEVTALYDGYVDLPASLLKGIDDKDLQSLLARMFVASEKG-VQTAVNAYLINTGDNLVLIDTGAA---------QCFG-PTLGVVQTNLKASGYQPEQVDTVLLTHLHPDHACGLVNADGSPAYPNATVEVPQAEAEFWLDEATMAKAPEGMQGMFKMARQAVAPYAKMNKLKPYKTEGELLPGVSLVASSGHTPGHTSYLFKSGGQSLLVWGDILINHAVQFAKPEVVWEFDVDSDQARQSRQRILAEAATDKLWVAGAH----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133236 for 2011 contacts (-66.3/contact) +
2D Compatibility (PS) -25626 + (NN) -5362 + (LL) 2204
1D Compatibility (HY) -8000 + (ID) 3250
Total energy: -173270.0 ( -86.16 by residue)
QMean score : 0.441
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