Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTLATLIFLVTLLFVLWQPKGLDIGITALTG--------AFIAVIT-GVVSFSDVFEVTGIVWNATLTFVSVIL------ISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIILLGAIVAAFFANDGAALILTPIVLAMVKN-----IGFSKRAIFPFIIASGFIADTTSLPLIVS------------NLVNIISADYFHVGF-VRYFSRMIIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKHPKDAINDLKLFKISWIVLVILLFG----YLISEFTKIPVSIFTGIIAFIFLMLARKSNAVNI-KQVIKGAPWNIVLFSIGMYIVVFGLR--------------------------NAGITLILAKILEYISNYGLFSTIL----GMGFISAFLSSIMNNMPTVLIDAIAIGQSNVHGMLKEGLIYANVIGSDLGPKITPIGSLAT----LLWLHVLTQKDVKISWGTYFKTGIIITIPV-------------LFITLIGLYLTLIIF |
| 3E2D Chain:A ((1-502)) | -AEIKNVILMIGDGMGPQQVGLLETYANQAPNSIYKGNKTAIYQLAQEGVIGSSLTHPEDAIVVDSACSATMLATGIYSSSEVIGIDSQGNHVETVLEKAKK-AGKATGLVSDTRLTHATPASFAAHQPHRSLENQIASDMLATGADVMLSGGLRHWIPKSTNDKGETYKQLEKLTQGDVYLKSKRKDDRNLLTEAEKDGYQLAFNRNMLDDAKGDKLLGLFAY-----SGMDDGIAYSNKKKS-----GERTQPSLKEMTQKALNILSKDEDGFFLMVEGGQIDWAGHSNDAGTMLHELLKFDEAIQTVYEWAKDREDTIVIVTADHETGSFGFSYSSNDLPKPQKRSGEAFADRDYAPNFNFGAFDILDGLYNQKQSYYGMISEFQKLDKSLQTPEKLAEIVNKNSEFPITAEQAKNVLASKPNPYRLAQHKYLSAEEVPAINDFDAFFPYNDRGNLLAREQATGQNIVWGTGTHTHTPVNVFAWGPAEKILPVSKIMHHSELGEYIKQQVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -538062 for 3667 contacts (-146.7/contact) +
2D Compatibility (PS) -43264 + (NN) -2233 + (LL) 1348
1D Compatibility (HY) 9600 + (ID) 3250
Total energy: -575861.0 ( -157.04 by residue)
QMean score : 0.149
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