Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQINNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQFLDLSK---YQGIDKNRIKRMLVDRPTLLKHTDDFLKAAKDK-HVNEVYLISHALLETGAVKSELANGVEIDGKKYYNFYGVGALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEHQYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK |
| 4Q2W Chain:A ((135-278)) | -------------------------------------------------------------------------------------------------ENPFLFKDLTEATNYSAEELDKVFSLLNINNSLLENKGATFKEAEEHYHINALYLLAHSALESNWGRSKIA-------KDKNNFFGIT-----------------TFDDVDKGILGATKWIKENYIDRGR-----TFLGNKASGMNVEYASDPYWGEKIASV----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q2W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6321 for 1000 contacts (-6.3/contact) +
2D Compatibility (PS) -13346 + (NN) -3671 + (LL) 10048
1D Compatibility (HY) -8000 + (ID) 1700
Total energy: -22990.0 ( -22.99 by residue)
QMean score : 0.311
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