Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDNSTKYLLYIQTATSNHLETNCVFLHCDYILKVPINKLVSYYAKLHLSSQSVLIETAKNILNINKLVPIYINPKTILFPLKHKRAPIQIYINAHYIVGMTAIENSTLIHFQEGIQLEVDEPFSLVSKKCHESLALKHFIENTISN
1UUS Chain:A ((430-487))
---------------------------------------------------------------------PIYPATLTAHFPLKFLAGTRKCSVNLKFGVNIRDLDNVTTT-----VESDASNPFVVITNECQ---------------
General information:
TITO was launched using:
RESULT:
Template:
1UUS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20226 for 236 contacts (-85.7/contact) +
2D Compatibility (PS) -6433 + (NN) -2565 + (LL) 7204
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -24770.0 ( -104.96 by residue)
QMean score : 0.024
(partial model without unconserved sides chains):
PDB file :
Tito_1UUS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UUS-query.scw
PDB file :
Tito_Scwrl_1UUS.pdb
: