Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITFENIQQLEKYTLMTMHGLFNQLKLGIISIDNAEHTLFTPYMMESLSSLGV-KPDIIDLIHKGTELEDFAAFNLSIEDTVTVCLQRTEELLNQYKNVEFNDKILINWRIIQE
2J5Y Chain:A ((13-44))
------------------------------------------DAIAELKKAGITSDFYFNAINKAKTVEEVNAL----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2J5Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18532 for 155 contacts (-119.6/contact) +
2D Compatibility (PS) -3107 + (NN) 514 + (LL) 7348
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -16077.0 ( -103.72 by residue)
QMean score : 0.789
(partial model without unconserved sides chains):
PDB file :
Tito_2J5Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J5Y-query.scw
PDB file :
Tito_Scwrl_2J5Y.pdb
: