Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------MSKDKDPKLNYHEEENSM-VTDFEDLKELGKEMEQISDQNDQEKNSEEDSQ-------------------------------------------------------------------------------------------- |
| 3JYG Chain:A ((2-181)) | SLIYQIAKEFDFCYGHRVWSQELNPDFSLDPCLSCRHLHGHQGKVIVHLESREL---------QRGMVTDFAHLNWFKRFIDEVLDH--RFIIDIDDPLFPTLLPHFADKSALVWMEEGYARVDFERIKGESSPILELYESFVVVRFVPTSESIASWLLELLRSRIQPLGVKVSSVEFLETPKSRARVYNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11226 for 139 contacts (80.8/contact) +
2D Compatibility (PS) -4059 + (NN) -2074 + (LL) 312
1D Compatibility (HY) -2400 + (ID) 350
Total energy: 2655.0 ( 19.10 by residue)
QMean score : 0.803
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