Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGSSIVLKLLKVTHYYRNKQNKKWYLPFGYDAEDIDLNNISLHIYQGEALGIIGEPESSKALVGQLLAGAIKPDKGKVVC--------TEDLFYGYIEDQSLIHQ--------TVEAYTAQLVQL--FPYEINDHKAEQIIQYAHLGDYKTKPVNHISKAAYAQLLLSIARSSKSNIIILNHVIDYLTPQFMERAIELTNDYIEN-NLTIVSIGDDIDKISQVSNYIAWFSHGQLRMEGSLKQVIPSFKEHERDRLSLNSKEEIENFDLDWKKNRTRIPEMTYNFKRVERYNHAKPPKFLVRFWTLASGTILGLALMMLLIFNNIGIISITDFTNRATMQNENKDPYGEKLAYGIAFNGSVDMQGDKQVTIPKYSVVTITGENSKNYRVTADNKTYYVSKDKLEYFNPAGLYQTHSFKKLAPYMKSNYSNYYAYFNSQLHKKHSSVIKTLVPDDDNRFVASVTQQPIQLLFNDNNQLYGFVYPIVDKKELKDKFNINNNIWITKVGNGYCIANLKEDKWIYIEL |
3TUZ Chain:H ((23-362)) | ----HMIKLSNITKVFHQGTRTIQALN-----------NVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHL--------------------------------------------------------------------DIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNV------------------NNNIISAQMDYAG-------------------------------------------------------------------GVKFGIMLTEMHG---------------TQQDTQAAIAWLQEHH-VKVEV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -171581 for 2454 contacts (-69.9/contact) +
2D Compatibility (PS) -34825 + (NN) -12414 + (LL) 11484
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -221886.0 ( -90.42 by residue)
QMean score : 0.389
|
|
|