Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTKIEEE
1QXW Chain:A ((1-249))
MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTKI---
General information:
TITO was launched using:
RESULT:
Template:
1QXW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106140 for 2246 contacts (-47.3/contact) +
2D Compatibility (PS) -27767 + (NN) -17237 + (LL) 312
1D Compatibility (HY) -32400 + (ID) 12450
Total energy: -195682.0 ( -87.12 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_1QXW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QXW-query.scw
PDB file :
Tito_Scwrl_1QXW.pdb
: