Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
2DF4 Chain:C ((2-100))
-TKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
General information:
TITO was launched using:
RESULT:
Template:
2DF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2284 for 412 contacts (-5.5/contact) +
2D Compatibility (PS) -10383 + (NN) -1809 + (LL) 208
1D Compatibility (HY) -10400 + (ID) 4950
Total energy: -29618.0 ( -71.89 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_2DF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DF4-query.scw
PDB file :
Tito_Scwrl_2DF4.pdb
: