Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDEAKFVLLQLYSIYLGRIDEGMSKHSASYFGSDESSFNAFFLG---FNFEDYIDAVLELKHRDFVIASAEDGGFLEMALSREGIAYSESESKKDYKTLMGLIRDLKKLII
1K9I Chain:A ((18-61))
---------------------------------------NCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSR-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13935 for 188 contacts (-74.1/contact) +
2D Compatibility (PS) -4303 + (NN) -290 + (LL) 4756
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -18172.0 ( -96.66 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_1K9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K9I-query.scw
PDB file :
Tito_Scwrl_1K9I.pdb
: