Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKEQLKKYIYEYVKEYK-EIPIYQLEDLFKEINHDYIGRTSITHDKDENIVFWSGWNKITMFALIELVKSEQLDLVYRGSFIMRYLLDGRVPNLPLAICYPEDGQQTDVPSWVPMVLRINKEEKIK
2DK8 Chain:A ((10-73))
ADPVEIENRIIELCHQFPHGITDQVIQNEMPHI--E---------------------AQQRAVAINRLLSMGQLDLLRS-NTGLLYRI---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2DK8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57202 for 418 contacts (-136.8/contact) +
2D Compatibility (PS) -6723 + (NN) -3917 + (LL) 3016
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -68626.0 ( -164.18 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2DK8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DK8-query.scw
PDB file :
Tito_Scwrl_2DK8.pdb
: