Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MIRNRLSELLSERGLKISRVAKDVKIARSSLTSMAQNDSEMIRYDAIDKLCSYLHISPSEFFEHNPINFDFTFDEEPNYKINDVFEGFEVTANITHAFSIENFDFEILVDVELDNRQKLNFDLDVSYKETEKITNSQHRFIFTIKNEDENIGLKKYVDSLSAGLKNLLFKKINQKLSGYVSEIIVKNIDDIEELFPNKGEKSTTLHKEILQTDSRLSSDIFKEY
3B7H Chain:A ((1-76))
MKTDGEFVSEHLMELITQQNLTINRVATLAGLNQSTVNAMFEGRSKRPTITTIRKVCGTLGISVHDFFDFPPYNEV----------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3B7H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56119 for 452 contacts (-124.2/contact) +
2D Compatibility (PS) -7235 + (NN) -2751 + (LL) 10364
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -62791.0 ( -138.92 by residue)
QMean score : 0.761
(partial model without unconserved sides chains):
PDB file :
Tito_3B7H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B7H-query.scw
PDB file :
Tito_Scwrl_3B7H.pdb
: