Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
4MZP Chain:A ((15-127))
-IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNA------
General information:
TITO was launched using:
RESULT:
Template:
4MZP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67224 for 801 contacts (-83.9/contact) +
2D Compatibility (PS) -12540 + (NN) -6030 + (LL) 692
1D Compatibility (HY) -15600 + (ID) 5650
Total energy: -106352.0 ( -132.77 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_4MZP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MZP-query.scw
PDB file :
Tito_Scwrl_4MZP.pdb
: