Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKPKIALTIAGTDPTGGAGVMADLKSFHSCGVYGMGVVTSIVAQNTLGVQHIHNLNHQWVDEQLDSVFNDTLPHAIKTGMIATADTMETIRHYLMQHESIPYVIDPVMLAKSGDSLMDNDTKQNLQHTLLPLADVVTPNLPEAEEITGLTIDSEEKIMQAGRIFINEIGSKGIIIKGGHSNDTDIAKDYLFTNEGVQTFENERFKTKHTHGTGCTFSAVITAELAKGRPLFEAVHKAKKFISMSIQYTPEIGRGRGPVNHFAYLKKEGLDDELSK |
| 1UB0 Chain:A ((2-258)) | ----RVALTIAGSDSGGGAGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQRVHLLPPEVVYAQIESVAQDFPLHAAKTGALGDAAIVEAVAEAVRRFGVRPLVVDPVM---------AKEAAAALKERLFPLADLVTPNRLEAEALLGRPIRTLKEAEEA-AKALLALGPKAVLLKGGHL---E-AVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGRPLAEAVAEAKAYLTRALKTAPSLGHGHGPLDHWA------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131321 for 2242 contacts (-58.6/contact) +
2D Compatibility (PS) -26539 + (NN) -8706 + (LL) 1396
1D Compatibility (HY) -14400 + (ID) 5550
Total energy: -185120.0 ( -82.57 by residue)
QMean score : 0.517
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