Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKTLLASSLAVGLGIVAGNAGHEAHASEADLNKASLAQMAQSNDQTLNQKPIEAGAYNYTFDYEGFTYHFESDGTHFAWNYHATGANGANMSAQAPATNNVEPSAVQANQVQSQEVEAPQNAQTQQPQASTSNNSQVTATPTESKASEGSSVNVNAHLKQIAQRESGGNIHAVNPTSGAAGKYQFLQSTWDSVAPAKYKGVSPANAPESVQDAAAVKLYNTGGAGHWVTA------- |
1XSF Chain:A ((1-108)) | --------------------------------------------------------------------------------------------------------------------------------NVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGN-WAINTGNGYYGGVQFDQGTWEANGGLRYAP-RADLATREEQIAVAEVTRLRQGWGAWPVCAARAGAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XSF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4586 for 710 contacts (6.5/contact) +
2D Compatibility (PS) -11031 + (NN) -8070 + (LL) 7788
1D Compatibility (HY) 0 + (ID) 1250
Total energy: -7977.0 ( -11.24 by residue)
QMean score : 0.355
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