Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMGIMFIGVGLVEALPIIGVVIAFMTFAG
2XQU Chain:A ((12-77))
-SVIAAALAVGIGSIGPGLGQGQAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALVLLF-
General information:
TITO was launched using:
RESULT:
Template:
2XQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41974 for 384 contacts (-109.3/contact) +
2D Compatibility (PS) -6700 + (NN) 1457 + (LL) 340
1D Compatibility (HY) 2000 + (ID) 450
Total energy: -45327.0 ( -118.04 by residue)
QMean score : 0.127
(partial model without unconserved sides chains):
PDB file :
Tito_2XQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XQU-query.scw
PDB file :
Tito_Scwrl_2XQU.pdb
: