Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKILNTQLIGIFNRLEKQSLEIQMAAQCLIQAIGGEGYVYVKGYDDLQFFESFILHSDERLKSSRKLDAIKDFKEIDSTDRVLLFAPFYN-DQVALDIQKLIDLDIDVVLISNKPKTDDFPDHLVHFIDLSTPRPIVYTEDYDKIVQPHAIALNYVYYDIYTQMIEMTRDLEL
3JX9 Chain:A ((2-169))
MLKILATQFNGKLQTLTKQEDELFDVVRLLAQALVGQGKVYLDAYGEFEGLYPMLSDGPDQMKRVTKIK--D-HKTLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITLGDV-TETLERSIAPLALKFDKGLLPAEDGSRHGLPSLALGAFLLTHILTQLQEMTEEW--
General information:
TITO was launched using:
RESULT:
Template:
3JX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113671 for 1241 contacts (-91.6/contact) +
2D Compatibility (PS) -18096 + (NN) -11709 + (LL) 604
1D Compatibility (HY) -7600 + (ID) 1950
Total energy: -152422.0 ( -122.82 by residue)
QMean score : 0.660
(partial model without unconserved sides chains):
PDB file :
Tito_3JX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JX9-query.scw
PDB file :
Tito_Scwrl_3JX9.pdb
: