Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKESGL
2M30 Chain:B ((9-103))
--------NTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKE---
General information:
TITO was launched using:
RESULT:
Template:
2M30.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50798 for 599 contacts (-84.8/contact) +
2D Compatibility (PS) -10061 + (NN) -5471 + (LL) 752
1D Compatibility (HY) -12800 + (ID) 4750
Total energy: -83128.0 ( -138.78 by residue)
QMean score : 0.699
(partial model without unconserved sides chains):
PDB file :
Tito_2M30.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M30-query.scw
PDB file :
Tito_Scwrl_2M30.pdb
: