Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDV-TEGQE-VDFVDATLAVAKDVQSQEGNLGIVIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGDTLAKNVVKGFVEGKYDGGRHQIRVDMLNKMC
3PH4 Chain:A ((21-163))
MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEFQGGRHATRVGKIGEI-
General information:
TITO was launched using:
RESULT:
Template:
3PH4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78761 for 1191 contacts (-66.1/contact) +
2D Compatibility (PS) -15434 + (NN) -9349 + (LL) 56
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -116538.0 ( -97.85 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_3PH4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PH4-query.scw
PDB file :
Tito_Scwrl_3PH4.pdb
: