Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKIENEIVNKTYLAINSLEELRNMIGIKSDYFYKCLYVNDHFYNVIKIPKRKKDEYRELMIPNMALKNIQRWILDNVLYRR---QVHKCATGFVPRKSIVNNAI-PHVGQKYILKMDIENFFPSITFKQVRKIFSEMGYKFELATALAN------------LCTVNNQLPQGAPTSPYIANIIFYNIDKRIFSYCQKNNLRYTRYADDITISGSNKVSFSKEIIREIVNQYNFRINESKTIMFK----PGDRKKVTGIIVNEKISVPKTLIREVRKQIYFVNKFGLEEHLIRNNYSLDYEQQFIMSIYGKISFIKMIDFKKGVSLQKKFNEVLGNIESSNMYRDNIDFDDIELHWIN
3AVX Chain:A ((900-1121))------------------------------------------FNKAVTVPKNSK-TDRCIAIEPGWNMFFQLGIGGILRDRLRCWGIDLN------DQTINQRRAHEGSVTNNLATVDLSAASDSISLALCELLLPP-----GWFEVLMDLRSPKGRLPDGSVVTYEKISSMGNGYTFELESLIFASLARSVCEILDLDSSEVTVYGDDIILPSC-----AVPALREVFKYVGFTTNTKKTFSEGPFRESCGKHYYSGVDVTPF----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3AVX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67425 for 1358 contacts (-49.7/contact) +
2D Compatibility (PS) -19265 + (NN) -241 + (LL) 11364
1D Compatibility (HY) -7200 + (ID) 1550
Total energy: -84317.0 ( -62.09 by residue)
QMean score : 0.320

(partial model without unconserved sides chains):
PDB file : Tito_3AVX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AVX-query.scw
PDB file : Tito_Scwrl_3AVX.pdb: