Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVRNSYKVKHKYLKV--NRSNMITYKSNQYSASAEYCGKTVEVQVYDQKQHV
1OJY Chain:A ((30-68))
-----TYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNRSCEV---------
General information:
TITO was launched using:
RESULT:
Template:
1OJY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1918 for 167 contacts (11.5/contact) +
2D Compatibility (PS) -3871 + (NN) -302 + (LL) 1208
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -6797.0 ( -40.70 by residue)
QMean score : 0.135
(partial model without unconserved sides chains):
PDB file :
Tito_1OJY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OJY-query.scw
PDB file :
Tito_Scwrl_1OJY.pdb
: