Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVKNATPGGVVKKGDVVKAVIVRTKSGVRRNDGSYIKFDENACVIIRDDKGPRGTRIFGPVARELREGNFMKIVSLAPEVL
1WHI Chain:A ((1-122))
MIQQESRLKVADNSGAREVLVIKVLGGSGRRYANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFDENACVIIRDDKSPRGTRIFGPVARELRDKDFMKIISLAPEVI
General information:
TITO was launched using:
RESULT:
Template:
1WHI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82079 for 944 contacts (-86.9/contact) +
2D Compatibility (PS) -13546 + (NN) -7359 + (LL) 0
1D Compatibility (HY) -15600 + (ID) 5200
Total energy: -123784.0 ( -131.13 by residue)
QMean score : 0.674
(partial model without unconserved sides chains):
PDB file :
Tito_1WHI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WHI-query.scw
PDB file :
Tito_Scwrl_1WHI.pdb
: