Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MSLENQLAELKYDYVRLQGDL------EKRESLNLDTSALVRQLKDIENEIRNVRAQMQD----
4L0R Chain:A ((33-106))
GINEELSEVLQTLQDEFGQMSFDHQQLAKLIQESPTVELKDKLECELEALVGRMEAKANQITKVRKYQAQLEKQ
General information:
TITO was launched using:
RESULT:
Template:
4L0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3584 for 264 contacts (-13.6/contact) +
2D Compatibility (PS) -6160 + (NN) -5676 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -19220.0 ( -72.80 by residue)
QMean score : 0.780
(partial model without unconserved sides chains):
PDB file :
Tito_4L0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L0R-query.scw
PDB file :
Tito_Scwrl_4L0R.pdb
: