Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANPIKIGIGGPVGAGKTQLIEKVVKRLSKEMSIGVITNDIYTKEDEKILVNSGVLPESRIIGVETGGCPHTAIREDASMNFAAIDELLERHDDIELIFIESGGDNLAATFSPELVDFSIYIIDVAQGEKIPRKGGQGMIKSDFFVINKTDLAPYVGASLEQMAEDTKVFRGKRPFTFTNLKTDEGLDEVIDWIERDTLLKGLS
4HI0 Chain:F ((2-196))
----VKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRERIIGVETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNAL-----
General information:
TITO was launched using:
RESULT:
Template:
4HI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96284 for 1631 contacts (-59.0/contact) +
2D Compatibility (PS) -21589 + (NN) -14639 + (LL) 348
1D Compatibility (HY) -23200 + (ID) 6000
Total energy: -161364.0 ( -98.94 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_4HI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HI0-query.scw
PDB file :
Tito_Scwrl_4HI0.pdb
: