Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNFKLRISTLLLIVILVVFAVLLIVNETKLFKNDVNYSFDEAVSMQQGKGIVQTKEEDGKFVEANNNEIAKAMTISHKDNDMKYMDITEKVPMSESEVNQLLK----GKGILENRGKVFLEAQEKYEVNVIYLVSHALVETGNGKSELAKGIKDGKKRYYNFFGIGAFDSSAVRSGKSYAEKEQWTSPDKAIIGGAKFIRNEYFENNQLNLYQMRWNPENPAQHQYASDIRWADKIAKLMDKSYKQFGIKKDDIRQTYYK |
4Q2W Chain:A ((135-289)) | --------------------------------------------------------------------------------ENPFLFKDLTEATNYSAEELDKVFSLLNINNSLLENKGATFKEAEEHYHINALYLLAHSALESNWGRSKIAKDKN-------NFFGIT-----------TFDD------VDKGILGATKWIKENYIDRGRTFL----GNKASGMNVEYASDPYWGEKIASVMMKINEKLGGK---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q2W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45064 for 1134 contacts (-39.7/contact) +
2D Compatibility (PS) -14777 + (NN) -5826 + (LL) 9452
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -67915.0 ( -59.89 by residue)
QMean score : 0.549
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