Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFNVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRN-GKVNVIEGIYESLVMDEYVKMTIGMPGLSETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIETSTQQ
2IL5 Chain:A ((8-171))
----NVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQ-QRNGKVNVIEGIYESLVMDEYVKMTIGMP--SETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIETSTQQ
General information:
TITO was launched using:
RESULT:
Template:
2IL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47485 for 1123 contacts (-42.3/contact) +
2D Compatibility (PS) -17167 + (NN) -1860 + (LL) 672
1D Compatibility (HY) -24000 + (ID) 7950
Total energy: -97790.0 ( -87.08 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_2IL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IL5-query.scw
PDB file :
Tito_Scwrl_2IL5.pdb
: