Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKLNLFINANETESYIDI--HAPKMNDHVQSIINAVNDLDKSHTLVGYIDKEIHIINVSDVITFQVINKNVTAITSNQKFKLKLRLYELEKQLPQHFIRISKSEIVNKYYIEKLLLEPNGLIRMYLKDAHYTYSSRRYLKSIKERLSI
1S12 Chain:A ((1-94))
------MIKVTVTNSFFEVTGHAPD-----KTLCASVSLLTQHVANFLKAEKKAKIKKESGYLKVKF--EELENCEVKVLAAMVRSLKELEQKFPSQ-IRVEVIDNGS-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1S12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21088 for 610 contacts (-34.6/contact) +
2D Compatibility (PS) -10177 + (NN) -4520 + (LL) 4796
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -36689.0 ( -60.15 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1S12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S12-query.scw
PDB file :
Tito_Scwrl_1S12.pdb
: