Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYVENSYLSKQLCFLFYVSSKEIIKKYTNYLKEYDLTYTGYIVLMAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIKSPLAEISVKVFNEFNISEREASDIINNLRNFVSKNFDYSDRK
4GXO Chain:B ((5-137))
------YLSKQLEFLFYVSSKEIIKKYTNYLKEYDLTYTGYIVLMAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIKSPLAEISVKVFNEFNISEREASDIINNLRNFVS---------
General information:
TITO was launched using:
RESULT:
Template:
4GXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70462 for 828 contacts (-85.1/contact) +
2D Compatibility (PS) -13552 + (NN) 811 + (LL) 680
1D Compatibility (HY) -20000 + (ID) 6600
Total energy: -109123.0 ( -131.79 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_4GXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GXO-query.scw
PDB file :
Tito_Scwrl_4GXO.pdb
: