Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METKEKIKVTTIDELTPLIGKKVIVKGKEVGLFLT-ESGTIHAIHNICPHKQG-PLSEGTVSG----EYVFCPLHDQKIDLNTGIVQEPDEGCVDVYEVEVTDGNVYICL
2JO6 Chain:A ((1-108))
--MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG
General information:
TITO was launched using:
RESULT:
Template:
2JO6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78031 for 750 contacts (-104.0/contact) +
2D Compatibility (PS) -11341 + (NN) -4331 + (LL) 312
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -99241.0 ( -132.32 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_2JO6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JO6-query.scw
PDB file :
Tito_Scwrl_2JO6.pdb
: