Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKLLTLFIVSMLILTACGKKESATTSSKNGKPLVVIYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKDKIK
3BCI Chain:A ((14-178))
-------------------------------GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKD---
General information:
TITO was launched using:
RESULT:
Template:
3BCI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48227 for 1311 contacts (-36.8/contact) +
2D Compatibility (PS) -17806 + (NN) -8981 + (LL) 3024
1D Compatibility (HY) -21600 + (ID) 8200
Total energy: -101790.0 ( -77.64 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_3BCI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BCI-query.scw
PDB file :
Tito_Scwrl_3BCI.pdb
: