Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQPDNKLEDFFSSQSTTFTEHEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGTAELYQPAHLVQNNDIIVITCNYRLGALGYLDWSYFN-KDFHSNNGLSDQINVIKWVHQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLDTLKSARNKAQYFQKMMRD-YLDTDDVTSLSTDDILMLMAKLKQSRGPSKGLDLIYAP-IKTDYIQND--------YPTTKPIFACYTKDEGDIYITSEQKKLSPQRFIDIME-LND-------IPLKYEDVQTAKQQSLAITHCYFKQPMKQFLQHLNIQDSNAQLWLAEFAWHDTSSAHYRSAYHILDMVFWFGNLQILAAHQYPTTAHLKFLSRQMQNDLANFAKSGKM-----PWPMYHNERRYYRTYQ |
| 1QE3 Chain:A ((4-466)) | QIVTTQYGKVKGTTENGVHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDATAYGPICPQPS------------LPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYS-DNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEK-ENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYLFFTPDSDVHSQETLDAALEYLLGKPLAEKAADLYPRS---LESQIHMMTDLLFWRPAVAYASAQS---HYAPVWMYRFDWHPEK-PPYNKAFHALELPFVFGNLDGL------ITDEVKQLSHTIQSAWITFAKTGNPSTEAVNWPAYHEETRETVILD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216225 for 3693 contacts (-58.5/contact) +
2D Compatibility (PS) -45853 + (NN) -28414 + (LL) 1432
1D Compatibility (HY) -24000 + (ID) 6900
Total energy: -319960.0 ( -86.64 by residue)
QMean score : 0.476
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