Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVINVVGAIIFSDNKILCAQRSEEMSLPLMWEFPGGKIEKNETEKEALIREIREEMKCDLIVGDKVITTEHEYDFGIVKLTTYKCTLNKELPTLTEHKSIEWLSINELDKLNWAPADIPAVNKIMTEG
3GWY Chain:A ((1-129))
-LKSIEVVAAVIRLGEKYLCVQR-------FRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDFEITMHAFLCHPVGQRYVLKEHIAAQWLSTREMAILDWAEADKPIVRKISE--
General information:
TITO was launched using:
RESULT:
Template:
3GWY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69133 for 863 contacts (-80.1/contact) +
2D Compatibility (PS) -12592 + (NN) -1340 + (LL) 536
1D Compatibility (HY) -8000 + (ID) 2550
Total energy: -93079.0 ( -107.86 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_3GWY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWY-query.scw
PDB file :
Tito_Scwrl_3GWY.pdb
: