Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNMNQTIMDAFHFRHATKQFDPQKKVSKEDFETILESGRLSPSSLGLEPWKFVVIQDQALRDELKAHSWGAAKQLDTASHFVLIFARKNVTSRSPYVQHML--RDIKKYEAQTIPAVEQKFDAFQA-DFHISDNDQALYDWSSKQTYIALGNMMTTAALLGIDSCPMEGFSLDTVTDILANKGILDTEQFGLSVMVAFGYRQQDPPKNKTRQAYEDVIEWVGPKE
2HAY Chain:A ((8-219))
---IHHQIQQALHFRTAVRVYK-EEKISDEDLALILDAAWLSPSSIGLEGWRFVVLDNKPIKEEIKPFAWGAQYQLETASHFILLIAEKHARYDSPAIKNSLLRRGIK--EGDGLNSRLKLYESFQKEDMDMADNPRALFDWTAKQTYIALGNMMMTAALLGIDTCPIEGFHYDKVNHILAKHNVIDLEKEGIASMLSLGYRLRDPKHAQVRKPKEEV--------
General information:
TITO was launched using:
RESULT:
Template:
2HAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110536 for 1555 contacts (-71.1/contact) +
2D Compatibility (PS) -22463 + (NN) -7773 + (LL) 628
1D Compatibility (HY) -20800 + (ID) 4800
Total energy: -165744.0 ( -106.59 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_2HAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HAY-query.scw
PDB file :
Tito_Scwrl_2HAY.pdb
: