Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLNNYSLKVK--------NKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAKDF---LLNNSGNI-----PKSISQ-NVTLISSSSNI----PND------ITKDFLLSLLKSKFENN--RQTFDKIYNILNIEAI---PSNVLLKNLSDGQKQKLKLLSFLLEDHDLIILDEVTNALDKKTVNEIYEFLNDFIQSHQTKTIINITHNLSDLSALPGKYFIFKDLQI------EEYQSKEEVINDYINL
3GFO Chain:A ((4-239))---EDYILKVEELNYNYSDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKLPEDEIRKRVDNALKRTGIEHLKDKPTHC----LSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVE-MQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEVIR-----


General information:
TITO was launched using:
RESULT:

Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94197 for 1424 contacts (-66.1/contact) +
2D Compatibility (PS) -21049 + (NN) -5957 + (LL) 1232
1D Compatibility (HY) -17600 + (ID) 3050
Total energy: -140621.0 ( -98.75 by residue)
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_3GFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFO-query.scw
PDB file : Tito_Scwrl_3GFO.pdb: