Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTIMASSLAVALGVTGYAAGTGHQAHAAEVNVDQAHLVDLAHNHQDQLNAAPIKDGAYDIHFVKDGFQYNFTSNGTTWSWSYEAANGQTAGFSNVAGADYTTSYNQGSDVQSVSYNAQSSNSNVEAVSAPTYHNYSTSTTSSSVRLSNGNTAGATGSSAAQIMAQRTGVSASTWAAIIARESNGQVNAYNP---SGASGLFQTMP-GWGPT-------------------NTVDQQINAAVKAYKAQGLGAWGF |
| 1YRO Chain:A ((17-105)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------GYQGISLLEWACVLFHTSGYDTQAVVNDNGSTEYGLFQISDRFWCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAIKGIDYWK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -15322 for 411 contacts (-37.3/contact) +
2D Compatibility (PS) -7088 + (NN) -3079 + (LL) 8268
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -22121.0 ( -53.82 by residue)
QMean score : 0.636
|
|
|