Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNVLYQHGTLGTLMAGLLEGTATINELLEHGNLGIATLTGSDGEVIFLDGKAYHANEHKEFIELKGDEKVPYASITNFKASKTFPLQQLSQDDVFAQIKNEMLSENLFSAVKIYGTFKHMHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFTPELFHGVGSAGFHIHFADDERAYGGHVLDFEVDDVVVEIQNFETFQQHFPVNNETFVKAKIDYKDVAEEIREAE
1XV2 Chain:A ((6-237))
--NVLYQHGTLGTLMAGLLEGTATINELLEHGNLGIATLTGSDGEVIFLDGKAYHANEHKEFIELKGDEKVPYASITNFKASKTFPLQQLSQDDVFAQIKNEMLSENLFSAVKIYGTFKHMHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFTPELFHGVGSAGFHIHFADDERAYGGHVLDFEVDDVVVEIQNFETFQQHFPVNNETFVKAKIDYKDVAEEIREAE
General information:
TITO was launched using:
RESULT:
Template:
1XV2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109791 for 1992 contacts (-55.1/contact) +
2D Compatibility (PS) -25062 + (NN) -2151 + (LL) 260
1D Compatibility (HY) -30800 + (ID) 11600
Total energy: -179144.0 ( -89.93 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1XV2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XV2-query.scw
PDB file :
Tito_Scwrl_1XV2.pdb
: