Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNRNVYDIEVSDYKGLTYKLEAFRGKVILVVNTATEC-IYSEQLKKLETLFQKYKDRGFVVLSFPNNNFDNRQPGSNEEILKISREKFGVTFPVLAKISVNGNDEHPLFTHLKNEQPGIFGSPIKWNFTKFIIDRQGNVVNRFLPMEDPLDISTNIEILLQESSS
2P5Q Chain:B ((10-169))
---ESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLEI---
General information:
TITO was launched using:
RESULT:
Template:
2P5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86156 for 1268 contacts (-67.9/contact) +
2D Compatibility (PS) -17214 + (NN) -10461 + (LL) -36
1D Compatibility (HY) -16800 + (ID) 3100
Total energy: -133767.0 ( -105.49 by residue)
QMean score : 0.672
(partial model without unconserved sides chains):
PDB file :
Tito_2P5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5Q-query.scw
PDB file :
Tito_Scwrl_2P5Q.pdb
: