Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES
3BFV Chain:A ((42-256))
MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIEDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPK---------------
General information:
TITO was launched using:
RESULT:
Template:
3BFV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99139 for 1815 contacts (-54.6/contact) +
2D Compatibility (PS) -23774 + (NN) -16039 + (LL) 468
1D Compatibility (HY) -28800 + (ID) 10700
Total energy: -177984.0 ( -98.06 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_3BFV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BFV-query.scw
PDB file :
Tito_Scwrl_3BFV.pdb
: