Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFDLVKLLNILKKNIKLLLILPAICLVVSTALTFFVMPDKYTASTQILVNMKKSSSDLA-----FQ-----NVQSSLQSVNTYTEIIKSPRILDKVSREFDGQ---------YSTAELNSFLKVTNQT------NSQ---IITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDNVTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF |
| 3B8M Chain:A ((64-205)) | ------------------------------------------KWTSAAVVTPPEPVQWQELEKTFTKLRVLDLDIKIDRTEAFNLFIKKFQSVSLLEEYLRSSPYVMDQDELDLHRAIVALSEKMKAVDDNASKKKDEPSLYTSWTLSFTAPTSEEAQTVLSGYIDYISALV---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29347 for 628 contacts (-46.7/contact) +
2D Compatibility (PS) -11001 + (NN) -1263 + (LL) 11292
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -34969.0 ( -55.68 by residue)
QMean score : 0.568
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